Full CharGer documentation¶

  • Home
    • Features
    • Documentation
    • Bugs/Requests
    • Changelog
    • License
  • Installation
    • Requirements
    • Install charger
  • Preparing the Inputs
    • Input variants
    • Known pathogenic variants
    • Inheritance gene table
    • HotSpot3D results
  • Command line interface
    • All options
  • ACMG guideline
    • Overview
    • Module definitions and criteria
    • References
  • Development Guide
    • Workflow overview
    • Set up environment
    • Check styles
    • Check types
    • Run functional tests
    • Test multiple Python versions
    • Build documentation
    • Update Dependencies
    • Develop using Visual Studio Code
  • CharGer Internals
    • config module
    • classifier module
    • result module
    • acmg_modules module
    • custom_modules module
    • variant module
    • csq module
    • io module
    • console module
    • argtype module
    • Reuse CharGer modules
  • Changelog
    • 0.6.0 (unreleased)
    • 0.5.4 (2019-09-30)
    • 0.5.3 (2019-09-30)

Indices and tables¶

  • Index

  • Module Index

  • Search Page

CharGer

Characterization of Germline variants

Table of Contents

  • Home
  • Installation
  • Preparing the Inputs
  • Command line interface
  • ACMG guideline
  • Development Guide
  • CharGer Internals
  • Changelog

  • PyPI releases
  • Source Code

Related Topics

  • Documentation overview
    • Next: CharGer: Characterization of Germline variants
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